Systems and Synthetic Biology
Systems and Synthetic Biology (SSB) are two newly emergent fields that combine experimental and theoretical approaches from engineering and other disciplines to solve both fundamental and applied problems in the biosciences and medicine.
Systems Biology attempts to understand how biological processes, within cells, a group of cells, or an entire tissue work at the ‘network level’, and generally seeks to determine how biological components (e.g., genes, proteins and biochemical reactions) interact to produce defined physiological responses and behaviors. Ultimately, this multi-scale understanding of biological systems is central to gaining a better understanding of the causes and progression of human diseases, and promises to lead to new therapeutic strategies that can be increasingly personalized.
Synthetic Biology is the purposeful design of biological systems possessing new functional properties, typically using molecular genetic parts. Approaches range from the engineering of novel proteins to the creation of artificial gene networks that can process information, sense and respond to complex set of environmental cues, and produce industrially important commodities for biological or biomedical applications.
The SSB research areas are tightly related through the use of quantitative experimental and theoretical approaches to characterize biological networks and to understand emergent functional relationships and behaviors. SSB researchers and project areas in the Rice Department of Bioengineering include:
|
Michael W. Deem, Ph.D.
- Newton's laws of biology
- Physical theories of evolution
- Theory of the immune system, including vaccine design
Deem Group
|
|
Michael Diehl, Ph.D.
- Regulation of intracellular transport
- In situ molecular pathway analyses
Macromolecular Systems Bioengineering Group
|
|
Oleg A. Igoshin, Ph.D.
- Computational modeling of biochemical networks
- Evolutionary design principles of cellular
information processing
- Multicellular signaling, self-organization and pattern formation
Cellular System Dynamics Group
|
|
Jianpeng Ma, Ph.D.
- Epigenetic regulation from individual elements to network
- Stem cells and cancer cells
- Anticancer drug development
- Bioinformatics, biochemistry, biophysics and
structural biology
Ma Laboratory
|
|
John T. McDevitt
- Nanomedicine
- Biofluidic-based diagnostics for cancer, infectious
diseases, and pathogen detection
- Cellular imaging systems
- Multi-class (combined cellular, genomic, proteomic,
general chemistry panels) multi-plexed sensor systems
Lab-on-a-Chip Sensor Technologies at tastechip.com
|
|
Amina A. Qutub, Ph.D.
- Regulation of intracellular hypoxic response in ischemia and cancer
- Neurogenesis and angiogenesis signaling
- Algorithm development for cell-level modeling coupled to imaging
Microvascular Systems Biology Laboratory
|
|
Robert Raphael, Ph.D.
- Auditory Systems Biology
- Micromechanical Biosystems
Membrane and Auditory Bioengineering Group
|
|
Ka-Yiu San, Ph.D.
- Metabolic and genetic engineering
- Systems biotechnology
- Genetic architecture and phenotype
Metabolic Engineering and Systems Biotechnology Laboratory
|
|
Junghae Suh, Ph.D.
- Reprogramming viruses as biomolecular infomation
processing devices
- Design of virus-based technologies to perturb and
manipulate genetic networks
- Laboratory directed evolution of viruses
Nanotherapeutics Research Laboratory
|
|
Jeffrey J. Tabor, Ph.D.
- Cellular sensing
- Signaling circuits
- Cell-cell communication
- Pattern formation and social interactions
Tabor Laboratory
|